Visualizing an aggregation pattern properly?
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So my program is giving me an aggregation pattern output whose video is available here (2nd figure) . I am pretty sure my output is correct. But the paper which I am trying to reproduce, shows aggregation patterns like below:

What I suspect is they trace the movements of the unit cells as in video and perhaps averaging it out. Please suggest me a way to visualize such an output.
Note : And I am not asking to code things for me. I am asking how to trace this cells properly or what command/way can help me do this?
TIA...
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