Bowtie 2 Support Package for Bioinformatics Toolbox

Version 23.2.0.0 (18.7 KB) by MathWorks Bioinformatics Team
Bowtie2 aligns DNA sequences to a reference genome.
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Updated 14 Sep 2023
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Bowtie 2 is an ultrafast, memory-efficient short read aligner. It aligns short DNA sequences (reads) to the human genome at a rate of over 25 million 35-bp reads per hour. Bowtie indexes the genome with a Burrows-Wheeler index to keep its memory footprint small: typically about 2.2 GB for the human genome (2.9 GB for paired-end).
MATLAB Release Compatibility
Created with R2024a
Compatible with R2023b and later releases
Platform Compatibility
Windows macOS Linux
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Version Published Release Notes
23.2.0.0

See release notes for this release on GitHub: https://github.com/mathworks/bowtie2/releases/tag/23.2.0
22.1.0

18.1.1.0

See release notes for this release on GitHub: https://github.com/mathworks/bowtie2/releases/tag/18.1.1
To view or report issues in this GitHub add-on, visit the GitHub Repository.
To view or report issues in this GitHub add-on, visit the GitHub Repository.