CaImAn

Complete Matlab pipeline for large scale calcium imaging data analysis
1.9K Downloads
Updated 4 Jul 2023

Matlab implementation of a source extraction and spike inference algorithm for large scale calcium imaging data analysis, based on a constrained matrix factorization approach (CNMF).

Cite As

Eftychios Pnevmatikakis (2026). CaImAn (https://github.com/flatironinstitute/CaImAn-MATLAB), GitHub. Retrieved .

MATLAB Release Compatibility
Created with R2015a
Compatible with any release
Platform Compatibility
Windows macOS Linux
Categories
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Acknowledgements

Inspired: Catrex GUI

Versions that use the GitHub default branch cannot be downloaded

Version Published Release Notes
1.0.0.0

Added an image
Updated name and link to github repo.

To view or report issues in this GitHub add-on, visit the GitHub Repository.
To view or report issues in this GitHub add-on, visit the GitHub Repository.