choroidSegmentation

Open-source algorithm for automatic choroid segmentation of OCT volume reconstructions

https://github.com/javimazzaf/choroidSegmentation

Version 2.0.0.0 (51.1 KB)
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23 Jun 2018

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Open-source algorithm for automatic choroid segmentation of OCT volume reconstructions. This software was developed by the HMR Biophotonics Lab (http://biophotonics.ca), Hospital Maisonneuve-Rosemont, Montreal, Quebec, Canada. It is open source and it was released under the GNU GENERAL PUBLIC LICENSE v3. It is only for research purposes. The algorithm is described in the paper "Open-source algorithm for automatic choroid segmentation of OCT volume reconstructions", Javier Mazzaferri, Luke Beaton, Gisèle Hounye, Diane N. Sayah, and Santiago Costantino, Scientific Reports 7. Article Number 42112, (2017). doi:10.1038/srep42112

Cite As

javimazzaf (2026). choroidSegmentation (https://github.com/javimazzaf/choroidSegmentation), GitHub. Retrieved .

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General Information

MATLAB Release Compatibility

  • Compatible with any release

Platform Compatibility

  • Windows
  • macOS
  • Linux
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Version Published Release Notes
2.0.0.0

- The software was updated to process newer versions of Spectralis Software. Tested on version 6.6.2.0.
- The software works fine in Matlab 2018a
1.0.0.0

Noted dependency on Bioinformatics Toolbox
Dependencies Updated
Updated article information
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Paper referenced
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Description corrected
To view or report issues in this GitHub add-on, visit the GitHub Repository.
To view or report issues in this GitHub add-on, visit the GitHub Repository.