Clarinet

Electrophysiology data analysis

https://clarinet-app.github.io/Clarinet/

Version 2.4 (3.12 MB)
127 Downloads
(1)
10 Jan 2020

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Clarinet is a MATLAB® app designed to analyze electrophysiology experiments.
Developed for neuroscience research, Clarinet allows you to analyze neuronal signals acquired with a variety of intracellular and extracellular recording techniques.

Features include:
+ Import Symphony v1 & v2 data
+ Plot epochs (2D and 3D plot)
+ Dynamically process epochs using custom functions
+ Search epochs that meet specific criteria
+ Color tag epochs for faster inspection
+ Extract features across group of epochs

For more information and to download the latest version visit: https://lucadellasantina.github.io/Clarinet/

Cite As

Luca Della Santina (2026). Clarinet (https://github.com/lucadellasantina/Clarinet), GitHub. Retrieved .

Categories

Find more on Electrophysiology in Help Center and MATLAB Answers

General Information

MATLAB Release Compatibility

  • Compatible with R2019b and later releases

Platform Compatibility

  • Windows
  • macOS
  • Linux
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Versions that use the GitHub default branch cannot be downloaded

Version Published Release Notes
2.4

Main app menu, app preferences, shared folder for custom processor / extractors
2.1

Split epochs according to a conditions tree
Find epochs matching "None" of the conditions specified
2.0

+ Features mode allows to collect features across epochs
1.7

Add custom tags to selected epochs
Remove selected tag from epoch
Processing pipelines are stored as an attribute of the epoch
Load pipeline used to process selected epoch
Added acknowledgement to contributing labs/projects in about window
1.6.1

Fixed error when searching text attributes of an epoch
1.6

Custom epoch processors stored in userpath/Clarinet/+customProcessors
Processing pipelines can be saved and loaded from disk
Fixed enabled/disabled status of processing pipeline buttons
1.5

+ New Epoch processors: interpolate, decimate, truncate,addNoise, addNonLinearity, powerSpectrum, subtractDrift
+ Fixed error when loading About dialog multiple times
1.4

Epoch processors called without arguments return default setting
Removed need for settings.device in UI processor settings
Display date and time each epoch was recorded inside EpochTree
SymphonyParser improvements
1.3

+ Epochs can be tagged with colors for easy grouping
+ Save button stores processed version of epochs and tags
+ Fixed error when trying to visualize search epochs before searching
1.2

Processing pipeline allows using multiple epoch processors in chain
Processor function definition now requires device as parameter
Fixed bug in processors displaying license instead of description
1.1

+ 2D/3D plot switcher
+ Search criteria can be either "Any" or "All" conditions to be met
+ Find dialog remembers last settings within session
+ Ensured destruction of dialogs before Clarinet is closed
1.0

To view or report issues in this GitHub add-on, visit the GitHub Repository.
To view or report issues in this GitHub add-on, visit the GitHub Repository.