GetAtomCoords

A function to retrieve the coordinates for all atoms in a Materials Studio file(s) and subsequently calculate the molecular descriptor R3m

https://github.com/deboyk/GetAtomCoords

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Cite As

Kevin (2026). GetAtomCoords (https://github.com/deboyk/GetAtomCoords/releases/tag/1.1.1), GitHub. Retrieved .

DeBoyace, Kevin, et al. “Modeling and Prediction of Drug Dispersability in Polyvinylpyrrolidone-Vinyl Acetate Copolymer Using a Molecular Descriptor.” Journal of Pharmaceutical Sciences, vol. 107, no. 1, Elsevier BV, Jan. 2018, pp. 334–43, doi:10.1016/j.xphs.2017.10.003.

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Acknowledgements

Inspired by: R3mCalculate

General Information

MATLAB Release Compatibility

  • Compatible with any release

Platform Compatibility

  • Windows
  • macOS
  • Linux
Version Published Release Notes Action
1.1.1

See release notes for this release on GitHub: https://github.com/deboyk/GetAtomCoords/releases/tag/1.1.1

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1.1.0

- Fixed bug that caused the function to crash when labels for 'Connect' were more than 2 digits.
- Fixed bug that caused the function to crash when the user selected 1 .xsd file and the molecule_id was not sequential

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1.0.2

fixed summary

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1.0.1

Included a PDF which gives more details about how to use this code.

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1.0.0

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To view or report issues in this GitHub add-on, visit the GitHub Repository.
To view or report issues in this GitHub add-on, visit the GitHub Repository.