Clear Filters
Clear Filters

I am getting error in the line load SPR_data.txt after intializing n_Au

2 views (last 30 days)
SPR_matrix_profile_comparison_v2()
Warning: Ignoring extra legend entries.
Error using load
Unable to find file or directory 'SPR_data.txt'.

Error in solution>SPR_matrix_profile_comparison_v2 (line 51)
load SPR_data.txt ;
function SPR_matrix_profile_comparison_v2
%variables
n_Ma=1.493; %målt ved 589nm @ 20 C
n_buffer=1.33156; %HEPES buffer
d_Ma=1E-9;
%vinkelting
theta_start=49.01; %GRADER! !
theta_slut=54.99; %GRADER! !
thetasteps=250;
theta_start=theta_start/360*2*pi ;
theta_slut=theta_slut/360*2*pi ;
deltatheta=(theta_slut-theta_start)/(thetasteps-1);
for t =1:1:thetasteps;
theta=theta_start+deltatheta*(t-1);
vinkel(t)=theta/(2* pi)*360 ;
end
figure(1) ;
hold on
for l =2:8
d_Au=l*10E-9;
[R_list]=spr_calc(n_Ma,n_buffer,d_Ma,d_Au,vinkel,theta_start,theta_slut,deltatheta,thetasteps,theta);
% [y_data]=data_import(vinkel);
if l==2
plot( vinkel , R_list ,' k ')
end
if l==3
plot ( vinkel , R_list ,' g ')
end
if l==4
plot ( vinkel , R_list ,'m')
end
if l==5
plot ( vinkel , R_list ,'c')
end
if l==6
plot ( vinkel , R_list ,' b ')
end
if l==7
plot ( vinkel , R_list , ' y ' )
end
if l==8
plot ( vinkel , R_list , ' r ' )
end
end
%axis ( [ theta_start *180/ pi theta_slut *180/ pi+1e-3 0 1 ] )
legend ( '20nm' , ' 30nm' , ' 40nm' , ' 50nm' , ' 60nm' , ' 70nm' , ' 80nm' , ' Location ' , ' NorthEastOutside ' )
%l egend ( 'n_3=1.3300 ' , 'n_3=1.3340 ' , 'n_3=1.3380 ' , 'n_3=1.3420 ' , 'n_3=1.3460 ' , 'n_3=1.3500 ' , ' Locatxlabel ( ' Angle o f incidence ' )
ylabel ( ' Reflectance ' );
load SPR_data.txt ;
[ sx , sy ]= size (SPR_data) ;
for i =1:250
y_data ( i )=SPR_data( i +150 ,2)/7E4 ;
%x_data ( i )=i ;
end
% options = fitoptions ( ' NonlinearLeastSquares ' ,method ) ;
%
%
% [ fresult , gof , fout ]= fit (vinkel, y_data , spr_calc , options ) ;
%figure(1) ;
%hold on
%plot( vinkel , R_list )
%hold on ;
%figure ( 1 ) ;
%plot(vinkel , R_list )
%figure (2) ;
%plot(vinkel , y_data ) ;
%figure(2) ;
%plot(vinkel , R_list-y_data ) ;
end
function [R_list] = spr_calc(n_Ma,n_buffer,d_Ma,d_Au,vinkel,theta_start,theta_slut,deltatheta,thetasteps,theta)
lambda_0=780E-9;
n_glass =1.77;
n_Au=0.17-4.93i;
n_Cr=3.11982+3.44408i ; % http : / / refractive index . info/? group=METALS&material=Chromium d.11n_Au=0.17-4.93i ; %Stenberg etal . 1991
n_Ma=n_Ma;
n_buffer=n_buffer ;
d_Cr=1E-9;
d_Au=d_Au;
d_Ma=d_Ma;
% theta_start=51; %GRADER! !
% theta_slut=55; %GRADER! !
% thetasteps=250;
n1=n_glass ;
n2=n_Cr ;
n3=n_Au;
n4=n_Ma;
n5=n_buffer;
eps1=n1^2;
eps2=n2^2;
eps3=n3^2;
eps4=n4^2;
eps5=n5^2;
k=2*pi/lambda_0 ;
% theta_start=theta_start /360*2* pi ;
% theta_slut=the ta_slut /360*2* pi ;
% deltatheta=( theta_slut-theta_start ) / (thetasteps-1);
for t =1:1: thetasteps
theta=theta_start+deltatheta *( t-1);
kx=k* n_glass * sin ( theta ) ;
kz1=sqrt (-(kx^2)+k^2* eps1 ) ;
if imag ( kz1 )>0 ,
kz1=-kz1 ;
end
kz2=sqrt (-(kx^2)+k^2* eps2 ) ;
if imag ( kz2 )>0 ,
kz2=-kz2 ;
end
kz3=sqrt (-(kx^2)+k^2* eps3 ) ;
if imag ( kz3 )>0 ,
kz3=-kz3 ;
end
kz4=sqrt (-(kx^2)+k^2* eps4 ) ;
if imag ( kz4 )>0 ,
kz4=-kz4 ;
end
kz5=sqrt (-(kx^2)+k^2* eps5 ) ;
if imag ( kz5 )>0 ,
kz5=-kz5 ;
end
beta_Cr=kz2*d_Cr ; %2*pi /lambda_0 *(n_Cr*d_Cr* cos ( theta ) ) ;
beta_Au=kz3*d_Au; %2*pi /lambda_0 *(n_Au*d_Au* cos ( theta ) ) ;
beta_Ma=kz4*d_Ma; %2*pi /lambda_0 *(n_Ma*d_Ma* cos ( theta ) ) ;
L_Cr=zeros(2) ;
L_Cr(1 ,1)=exp(-1i *beta_Cr ) ;
L_Cr(2 ,2)=exp (1i *beta_Cr ) ;
L_Au=zeros(2) ;
L_Au(1 ,1)=exp(-1i *beta_Au ) ;
L_Au(2 ,2)=exp (1i *beta_Au ) ;
L_Ma=zeros(2) ;
L_Ma(1 ,1)=exp(-1i *beta_Ma ) ;
L_Ma(2 ,2)=exp (1i *beta_Ma ) ;
b1=(n1/n2 )^2*( kz2 /kz1 ) ;
b2=(n2/n3 )^2*( kz3 /kz2 ) ;
b3=(n3/n4 )^2*( kz4 /kz3 ) ;
b4=(n4/n5 )^2*( kz5 /kz4 ) ;
rho_glass_Cr=(1-b1)/(1+b1 ) ;
rho_Cr_Au=(1-b2)/(1+b2 ) ;
rho_Au_Ma=(1-b3)/(1+b3 ) ;
rho_Ma_buffer=(1-b4)/(1+b4 ) ;
tau_glass_Cr=(2*(n1/n2 ))/(1+b1 ) ;
tau_Cr_Au=(2*(n2/n3 ))/(1+b2 ) ;
tau_Au_Ma=(2*(n3/n4 ))/(1+b3 ) ;
tau_Ma_buffer=(2*(n4/n5 ))/(1+b4 ) ;
H_glass_Cr=ones (2)/ tau_glass_Cr ;
H_glass_Cr(1,2)=rho_glass_Cr / tau_glass_Cr ; %rho i s r e f l e c t i o n c o e f f i c i e n t s
H_glass_Cr(2,1)=rho_glass_Cr / tau_glass_Cr ; %rho i s r e f l e c t i o n c o e f f i c i e n t s
H_Cr_Au=ones(2)/tau_Cr_Au ;
H_Cr_Au(1,2)=rho_Cr_Au/tau_Cr_Au ; %rho i s r e f l e c t i o n c o e f f i c i e n t s
H_Cr_Au(2,1)=rho_Cr_Au/tau_Cr_Au ; %rho i s r e f l e c t i o n c o e f f i c i e n t s
H_Au_Ma=ones (2)/tau_Au_Ma ;
H_Au_Ma(1,2)=rho_Au_Ma/tau_Au_Ma ; %rho i s r e f l e c t i o n c o e f f i c i e n t s
H_Au_Ma(2,1)=rho_Au_Ma/tau_Au_Ma ; %rho i s r e f l e c t i o n c o e f f i c i e n t s
H_Ma_buffer=ones (2)/ tau_Ma_buffer ;
H_Ma_buffer(1,2)=rho_Ma_buffer/tau_Ma_buffer ; %rho i s r e f l e c t i o n c o e f f i c i e n t s
H_Ma_buffer(2,1)=rho_Ma_buffer/tau_Ma_buffer ; %rho i s r e f l e c t i o n c o e f f i c i e n t s
S_glass_buffer=H_glass_Cr*L_Cr*H_Cr_Au*L_Au*H_Au_Ma*L_Ma*H_Ma_buffer ;
R_list(1,t )=( abs(S_glass_buffer ( 1 , 2 ) / S_glass_buffer ( 2 , 2 ) ) )^2 ;
% vinkel (t)=theta /(2* pi ) * 3 6 0 ;
end
% figure(1) ;
% hold on
% plot(vinkel , R_list )
% [ sy , sx ]= s i z e ( R_l i s t ) ;
%
% for i =1:(sx-5)
% theta=the ta_start+deltatheta *(i -1);
% diff_R_list(i)=(-R_list(i)+R_list(i+5))/(5) ;
% diff_vinkel(i)=theta/(2* pi)* 360 ;
% end
%
% for i =1:(sx-6)
% theta=theta_start+deltatheta *( i-1);
% if sign ( diff_R_list ( i ))==sign ( diff_R_list (i +1))
% signchange (i)=0;
% else
% sign_note=theta /(2* pi )*360
% end
% end
%
% figure(2)
% plot ( diff_vinkel , diff_R_list )
end
function [ y_data ] = data_import(vinkel)
load SPR_data.txt ;
[sx,sy]= size(SPR_data) ;
for i =1:250
y_data( i )=SPR_data( i +150 ,2)/7E4 ;
%x_data( i )=i ;
end
x_data=vinkel ;
% hold on ;
%
% figure(2) ;
% plot( x_data , y_data )
end
  1 Comment
Walter Roberson
Walter Roberson on 14 Dec 2021
You do not write a file of that name, so it is not obvious why you expect that the file will exist ?
Certainly it does not exist on the machines of the volunteers...

Sign in to comment.

Answers (1)

SACHIN KHANDELWAL
SACHIN KHANDELWAL on 19 Apr 2024
Hi Ananya,
After reviewing the error and the code you have provided, it appears that the issue arises because you are executing the script in the MATLAB Community.
If you have MATLAB installed, please ensure you are using the same working directory where the file 'SPR_data.txt' is located. Alternatively, you can use MATLAB Online to continue with your workflow.
I hope the information provided above will be helpful.
Thanks!

Categories

Find more on Read, Write, and Modify Image in Help Center and File Exchange

Tags

Community Treasure Hunt

Find the treasures in MATLAB Central and discover how the community can help you!

Start Hunting!