How to get RMSE, R-squared, and p-values from fitrgp?
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I have trained a model on a table including dependent variable 'Arm' and 6 independent variables 'duration' + 'heading' + 'speed' + 'cur_speed' + 'tidalrange' + 'Hs', using the code below.
How to get the RMSE, R-squared value, and p-values from the model?
I have tried using 'gprMdl.Rsquared.Ordinary' and 'gprMdl.Rsquared.Adjusted' but it doesn't seem to work
gprMdl = fitrgp(tableTest,'Arms~duration+heading+speed+cur_speed+tidalrange+Hs',...
'KernelFunction','squaredexponential','FitMethod','exact','PredictMethod',...
'exact','Standardize',1)
yPredict = predict(gprMdl,tableTest) % Create model predictions
yActual = tableTest.Arms % Observed data
residuals = yActual - yPredict % Calculate residuals
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Answers (1)
Anurag
on 23 Oct 2023
Hi Tobenna,
I understand that being unable to use the inbuilt metrics you want to find a way to calculate RMSE, R-squared and p-values from your code. Refer to the following code for doing the same:
% Calculate RMSE (Root Mean Square Error)
RMSE = sqrt(mean(residuals.^2));
% Calculate R-squared
SSR = sum((yPredict - mean(yActual)).^2); % Regression sum of squares
SST = sum((yActual - mean(yActual)).^2); % Total sum of squares
R2 = SSR / SST;
Lastly, for p-values, you would typically need to use linear regression models or other models that provide statistical tests for variable significance. GPR doesn't inherently provide p-values because it's not a linear regression model.
Hope this helped,
Regards,
Anurag
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