Clear Filters
Clear Filters

What is the difference between dicomrt2matlab's contours.points and contours.VoxPoints?

1 view (last 30 days)
What is the difference between dicomrt2matlab 's contours.Points and contours.VoxPoints?
One set appears flipped over the z-axis with different z-values; compare:
scatter3(contours(9).Points(:,1),contours(9).Points(:,2),contours(9).Points(:,3))
scatter3(contours(9).VoxPoints(:,1),contours(9).VoxPoints(:,2),contours(9).VoxPoints(:,3))
I am currently working to answer this question. readRTstructures contains the answer, e.g.:
contours(i).Points = vertcat(segments{:});
%%Save contour points in voxel coordinates
contours(i).VoxPoints = xfm \ [contours(i).Points ones(size(contours(i).Points,1), 1)]';
contours(i).VoxPoints = contours(i).VoxPoints(1:3,:)';
I suppose it involves the DICOM orientation; this webpage appears to be their source for xfm. getAffineXfm writes:
% Based on http://nipy.sourceforge.net/nibabel/dicom/dicom_orientation.html
It appears to me Points stores a representation of the contour surface for MATLAB, whereas VoxPoints is the equivalent for DICOM, according to nipy.org.

Answers (0)

Categories

Find more on DICOM Format in Help Center and File Exchange

Community Treasure Hunt

Find the treasures in MATLAB Central and discover how the community can help you!

Start Hunting!