How to extract a particular object in a rodent brain

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Hi, I have an image of a rat brain and I would like to extract the striatum from the image. Any suggestions on how to do this? I have attached an image for illustration. Str on the image implies striatum. I have tried thresholding, skull stripping, and k-means clustering but have not had any success. Thanks in advance
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John D'Errico
John D'Errico on 26 Sep 2016
Ah. I thought the rats just nibbled it away. :)

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