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Deploytool not including dependencies from toolboxes

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We're using deploytool to build a standalone executable version of our software. Unfortunately, deploytool is not including dependencies from the stats and ident toolboxes. I know this because one of our scripts calls two functions from these toolboxes; if these two lines are commented out, the executable runs fine. I tried many solutions, such as manually including the dependencies and copying the toolbox scripts to the same folder as our software, and none of those worked.
So my question is - why would deploytool not include dependencies from these toolboxes? How can I solve this?
I asked a similar question on here a week ago, but there were no answers. I'm asking it again in a different way in case anyone can help me out.
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Greg
Greg on 13 Apr 2017
I'm happy to change this question so that it can be opened again. Was it closed because it's a duplicate question?

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