Does H5info have issues with HDF5 databases that contain COMPOUND datatypes?
Show older comments
I have an HDF5 database that contains a COMPOUND datatype. When I run h5info on my database, it generates an error message. I tracked down the problem and it dealt with the COMPOUND datatype in my database. When I deleted my compound datatype from my database, h5info works. There's nothing special about my compound datatype. It contains an integer value and two double array. So my question is, can h5info handle COMPOUND datatypes, which are valid in HDF5?
7 Comments
nomo
on 14 Mar 2018
per isakson
on 27 Mar 2018
Edited: per isakson
on 27 Mar 2018
"[...] can h5info handle COMPOUND datatypes, which are valid in HDF5?" AFAIK: Yes.
I've used one COMPOUND datatype successfully for some years. I both write and read with Matlab. My compound datatype is
uint32,double,uint8
I use it to store time series of measured data. h5info is frequently called in my code. I just tested h5info (on Win7,R2016a)

.
Hard to tell why you have problems
per isakson
on 28 Mar 2018
- hdf-forum might be able to help.
- "It contains an integer value and two double array" That shouldn't cause problems. Sounds to me like Matlab has problems interpreting the metadata.
per isakson
on 2 Apr 2018
nomo
on 3 Apr 2018
per isakson
on 4 Apr 2018
I cannot help
I use HDFView 2.13, I guess you use 3.0. However, I don't recognize your text.
This is a description of my Compound data type.
>> info = h5info( filespec );
>> info.Groups(3).Datatypes.Type.Member(1).Datatype
ans =
Name: ''
Class: 'H5T_INTEGER'
Type: 'H5T_STD_U32LE'
Size: 4
Attributes: []
>> info.Groups(3).Datatypes.Type.Member(2).Datatype
ans =
Name: ''
Class: 'H5T_FLOAT'
Type: 'H5T_IEEE_F64LE'
Size: 8
Attributes: []
>> info.Groups(3).Datatypes.Type.Member(3).Datatype
ans =
Name: ''
Class: 'H5T_INTEGER'
Type: 'H5T_STD_U8LE'
Size: 1
Attributes: []
>>
Answers (0)
Categories
Find more on HDF5 Files in Help Center and File Exchange
Community Treasure Hunt
Find the treasures in MATLAB Central and discover how the community can help you!
Start Hunting!