Reorient, reslice and save new reoriented 3D medical image data

Hi Everyone,

I am trying to load a 3D medical image, reorient the image (hopefully manually in a way I can visualize the new orientation in 3D or in the three image planes) and save the new reoriented image. I am fairly new to image processing in Matlab so apologies if there is a simple solution but I thank you in advance for your help!

I am working with large high-resolution quantitative peripheral computed tomography scans (HR-pQCT) and micro CT data. The HR-pQCT images are in .ISQ image file format from a Scanco scanner.

Thanks again!

Answer 1

[Aman Vyas]

Hi,

You can download "readISQ" from following link :

https://www.mathworks.com/matlabcentral/fileexchange/62066-readisq?s_tid=srchtitle

This reader reads whole 3D ISQ images. You can then take look at a functions section of this link which will give you insight as to how read, load and save image.

Hope it helps!

[Burak]

is there any solution for dicom type files?