evanma

Active since 2016

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Does anyone have an altrnate code that does the equivalent of matlab's pentropy function?
I have been looking into alternative codes that do the equivalent of the matlab function pentropy. The function calculates the ...

6 years ago | 0 answers | 0

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Does Matlab hierarchal clustering work at all using centroid linkage for various distances?
If I am doing hierarchical clustering, if I am using centroid linkage with a distance function other than Euclidean, say, for ex...

7 years ago | 0 answers | 0

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For the Self Organizing Map, what is the default neighborhood function?
When it comes to the self organizing map, for example the way it is done using the selforgmap function, what is the default neig...

7 years ago | 1 answer | 0

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Question

How can the Self Organizing Map function plotsomplanes be used to create different color schemes and custom labels?
What I mean is, when using the function plotsomplanes(net) to create the plots of SOM weights, the function makes a plot and usi...

7 years ago | 2 answers | 0

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How do you go about creating a file similar to lotka.xml that can be used for Stoichiometry matrices?
If you have a file for a set of reactions, say a text file in the form glyc3p[c] + h2o[c] -----> glyc[c] + pi[c] atp[c] +...

7 years ago | 0 answers | 0

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Question

Why is it that this attempt to run a clustergram is not working?
I had looked at the distance functions documenting how to make custom distance functions as shown here: http://www.mathworks.com...

8 years ago | 1 answer | 0

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